NF-Core

Scalable, reproducible bioinformatics workflows using Nextflow & nf-core

The nf-core framework for community-curated bioinformatics pipelines

The standardization, portability and reproducibility of analysis pipelines are key issues within the bioinformatics community. Most bioinformatics pipelines are designed for use on-premises; as a result, the associated software dependencies and …

Scalable, reproducible bioinformatics workflows using Nextflow & nf-core

Migrating legacy workflows to Nextflow

Many researchers and institutions face similar issues: Having in-house legacy workflows written in bash or other formats and now facing issues with reproducibility, maintenance of these pipelines and the increasing computational demands poses severe …

BigData analytics with Nextflow and nf-core

The standardization, portability, and reproducibility of analysis pipelines is a renowned problem within the bioinformatics community. In the past, bioinformatic analysis pipelines have often been designed to work on-premise, deeply integrated into …

nf-core: Community built bioinformatics pipelines

The standardization, portability, and reproducibility of analysis pipelines is a renowned problem within the bioinformatics community. In the past, bioinformatic analysis pipelines have often been designed to work on-premise, deeply integrated into …

nf-core: Community built bioinformatics pipelines

The standardization, portability, and reproducibility of analysis pipelines is a renowned problem within the bioinformatics community. In the past, bioinformatic analysis pipelines have often been designed to work on-premise, deeply integrated into …

BigData Analytics with Nextflow & nf-core

Die Standardisierung, Portabilität und Reproduzierbarkeit von Analysemethoden ist nach wie vor ein bekanntes Problem in der angewandten Informatik und hierbei insbesondere in den Lebenswissenschaften. Analysetools sind oftmals auf spezifische …

Affordable WGS for personal usage (part 1)

Analyzing my own genome data from DanteLabs WGZ service.

nf-core: Community curated bioinformatics pipelines

The standardization, portability, and reproducibility of analysis pipelines is a renowned problem within the bioinformatics community. Bioinformatic analysis pipelines are often designed for execution on-premise, and this inevitably leads to a level …